Last updated:2013.6.17.

DDBJ staff publications (2001)

| 2008 | 2007 | 2006 | 2005 | 2004 | 2003 | 2002 | 2001 | 2000 | 1999 | 1998 | 1997 | 1996 |

*Bold are CIB-DDBJ members.

  • Bellgard M, Schibeci D, Trifonov E, Gojobori T. (2001) Early detection of G + C differences in bacterial species inferred from the comparative analysis of the two completely sequenced Helicobacter pylori strains. J. Mol. Evol. 53(4-5):465-8.
  • Cebria F, Nakazawa M, Mineta K, Ikeo K, Gojobori T, Agata K. (2001) Dissecting planarian central nervous system regeneration by the expression of neural-specific genes. Dev Growth Differ. 44(2):135-46.
  • Fukuchi S, Nishikawa K. (2001) Protein surface amino acid compositions distinctively differ between thermophilic and mesophilic bacteria. J Mol Biol. 309(4):835-43.
  • Goto K, Miyazaki S, Sugawara H. (2001) Genome Information Broker for Data Retrieval and Comparative Analysis of Microbial Genomes. Journal of Japan Society of Information and Knowledge. 10(4):4-13.
  • Fukami-Kobayashi K, Nishikawa K. (2001) Parallel evolution at molecular level: Phylogenetic analysis of the LacI/GalR family repressors and their PBP homologues. Genes and Genetic Systems. 76:439.
  • International Human Genome Sequencing Consortium. (2001) Initial sequencing and analysis of the human genome. Nature 409: 860-921.
  • Kinjo AR, Kidera A, Nakamura H, Nishikawa K. (2001) Physicochemical evaluation of protein folds predicted by threading. Eur Biophys J. 30(1):1-10.
  • Kinjo AR, Nishikawa K. (2001) Comparison of energy components of proteins from thermophilic and mesophilic organisms. Eur. Biophys. J. 30:378-84.
  • Misu S, Iizuka T, Kawanishi Y, Fukami K, Saitou N. (2001) CAMUS DB for amino acid sequence data. Genome Informatics. 502-3.
  • Miyazaki S, Sugawara H. (2001) Visualization of features in the Flat File by use of DDBJ-XML. Currents in computational molecular biology. 249-50.
  • Nakashima H, Yamashita S, Nishikawa K. (2001) Directional gene distributions of two mycoplasma species exhibited in the nucleotide composition space. Res. Comm. In Biochem., Cell & Mol. Biol. 5:27-35.
  • Noguchi T, Ito M, Matsuda H, Akiyama Y, Nishikawa K. (2001) Prediction of protein secondary structure using the threading algorithm and local sequence similarity. Res. Comm. In Biochem., Cell & Mol. Biol. 5:115-31.
  • Osawa M, Yuasa I, Kitano T, Heinke J, Kaneko M, Saitou N, Umetsu K. (2001) Haplotype analysis of human alpha2-HS glycoprotein (fetuin). Annals of Human Genetics. 65(1):27-34.
  • Osawa S, Gojobori T. (2001) Preface. J. Mol. Evol. (Thomas Jukes special issue) 53(4-5):257.
  • Ota M, Isogai Y, Nishikawa K. (2001) Knowledge-based potential defined for a rotamer library to design protein sequences. Protein Eng. 14:557-64.
  • RIKEN Genome Exploration Research Group Phase II Team and FANTOM Consortium (Okazaki Y, Gojobori T, et al.), Genelal organizer: Y.Hayashizaki (2001) Functional anotation of a full-length mouse cDNA collection. Nature. 409(6821):685-90.
  • Sanders AR, Cao Q, Taylor J, Levin TE, Badner JA, Cravchik A, Comeron JM, Saitou N, Del Rosario A, Salvi DA, Walczyk KA, Mowry BJ, Levinson DF, Crowe RR, Silverman JM, Gejman PV. (2001) Genetic diversity of the human serotonin receptor 1B (HTR1B) gene. Genomics. 72(1):1-14.
  • Sato S, Tanaka M, Miura H, Ikeo K, Gojobori T, Takeuchi T, Yamamoto H (2001) Functional conservation of the promoter regions of vertebrate tyrosinase genes. J Investig Dermatol Symp Proc. 6(1):10-8.
  • Sato T, Terabe M, Watanabe H, Gojobori T, Hori-Takemoto C, Miura Ki. (2001) Codon and base biases after the initiation codon of the open reading frames in the Escherichia coli genome and their influence on the translation efficiency. J Biochem. 129(6):851-60.
  • Suzuki Y, Gojobori T, Nei, N. (2001) ADAPTSITE:detecting natural selection at single amino acid sites. Bioinformatics. 17(7):660-1.
  • Suzuki Y, Gojobori T. (2001) Positively selected amino acid sites in the entire coding region of hepatitis C virus subtypes 1b. Gene. 276(1):83-7.
  • Suzuki Y, Wyndham A, Gojobori T. (2001) Virus Evolution. Handbook of statistical genetics, eds. D.J.Balding, M.Bishop, and C.Canning. John Wiley & Sons. 377-413.
  • Tanaka H, Chinami M, Mizushima T, Ogasawara K, Ota M, Tsukihara T, Yutani K. (2001) X-ray crystalline structures of pyrrolidone carboxyl peptidase from a hyperthermophile, Pyrococcus furiosus and its cys-free mutant. J. of Biochem. 130:107-18.
  • Tsunoyama K, Bellgard MI, Gojobori T. (2001) Intragenic variation of synonymous substitution rates is caused by nonrandom mutations at methylated CpG. J Mol Evol. 53(4-5):456-64.
  • Umetsu K, Tanaka M, Yuasa I, Saitou N, Naito E, Ago K, Nakayashiki N, Miyoshi A, Kashimura S, Watanabe G, Osawa M. (2001) Multiplex amplified product length polymorphism analysis to rapidly detect human mitochondrial DNA variations. Electrophoresis. 22:3533-8.
  • Yamamoto M, Lin X-H, Kominato Y, Hata Y, Noda R, Saitou N, Yamamoto F. (2001) Murine equivalent of the human histo-blood group ABO gene is a cis-AB gene and encodes a glycosyltransferase with both A and B transferase activity. Journal of Biological Chemmistry. 276(17):13701-8.
  • Yuasa I, Umetsu K, Ago K, Sun C-S, Pan I-H, Ishida T, Saitou N, Horai S. (2001) Population genetic studies on nine aboriginal ethnic groups of Taiwan. II. Serum protein systems. Anthropological Science. 109(4):257-73.