Last updated:2017.5.17.

Data Archives

Data Download

FTP Server ftp://ftp.ddbj.nig.ac.jp/
Latest Release Information

DDBJ Release Data

DDBJ prepares and diffuses a snapshot of the International Nucleotide Sequence Databases of DDBJ/EMBL/GenBank four times a year.

DDBJ Release Notes
conventional sequence data
conventional sequence data in the latest periodical release
new conventional sequence data
Daily update of conventional sequence data after the latest periodical release
WGS data
Whole Genome Shotgun data
TSA data
Transcriptome Shotgun Assembly data
TLS data
Targeted Locus Study data

DAD Release Data

Amino acid sequence database extracted from conventional sequence data

Release Notes
DAD Release
Amino acid sequence data extracted from conventional sequence data in the latest DDBJ periodical release
New DAD data
Amino acid sequence data extracted from daily update of conventional sequence data after the latest DDBJ periodical release

Patent originated amino acid sequence data

PATENT
amino acid (AA) sequence data transferred from Japan Patent Office (JPO) and Korean Intellectual Property Office (KIPO)

Nucleotide sequence data not included in DDBJ release

DDBJ Release does NOT include the following categories data.

TPA
Third Party Data(TPA) data
MGA
Mass sequences for Genome Annotation data
16S rRNA (Prokaryotes) READMEs
16S rRNA (Prokaryotes) in FASTA format
sequence data extracted from conventional sequence data in the latest DDBJ periodical release

Various Data

As well as nucleotide sequence data, DDBJ releases various submitted data.

DDBJ Sequence Read Archive
Sequencing data from next-generation sequencing platforms.
DDBJ Trace Archive
Sequence chromatograms (traces), base calls, and quality estimates for single-pass reads from various large-scale sequencing projects.
DDBJ BioProject Database
Project data, summary, schema of the BioProjects released by DDBJ
DDBJ BioSample Database
Data, summary,and schema for biological source materials or samples, released by DDBJ

Mirrored Databases

ArrayExpress
Refseq
UniProt




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