Codes Used in Sequence Description
Nucleotide
Amino Acid
- Amino Acid Codes
- Modified and Unusual Amino Acids
The amino acid code that is used with the International Nucleotide Sequence Database is as follows. These amino acids are described with one letter abbreviation in amino-acid sequence for the coding region.
The listed amino acid abbreviations are legal values for qualifiers /transl_except, /codon and /anticodon. Those that are not included in "Amino acid codes", please refer to Modified and Unusual Amino Acids.
| Abbreviation | 1 letter abbreviation | Amino acid name |
| Ala | A | Alanine |
| Arg | R | Arginine |
| Asn | N | Asparagine |
| Asp | D | Aspartic acid |
| Cys | C | Cysteine |
| Gln | Q | Glutamine |
| Glu | E | Glutamic acid |
| Gly | G | Glycine |
| His | H | Histidine |
| Ile | I | Isoleucine |
| Leu | L | Leucine |
| Lys | K | Lysine |
| Met | M | Methionine |
| Phe | F | Phenylalanine |
| Pro | P | Proline |
| Pyl | O | Pyrrolysine |
| Ser | S | Serine |
| Sec | U | Selenocysteine |
| Thr | T | Threonine |
| Trp | W | Tryptophan |
| Tyr | Y | Tyrosine |
| Val | V | Valine |
| Asx | B | Aspartic acid or Asparagine |
| Glx | Z | Gultamic acid or Glutamine |
| Xaa | X | Any amino acid |
| Xle | J | Leucine or Isoleucine |
| TERM | termination codon |
- References
-
- IUPAC-IUB Joint Commission on Biochemical Nomenclature.Nomenclature and Symbolism for Amino Acids and Peptides.
Eur. J. Biochem. 138: 9-37 (1984). - DDBJ/EMBL/GenBank Feature Table Definition 7.4.3 Amino acid abbreviations
- IUPAC-IUB Joint Commission on Biochemical Nomenclature.Nomenclature and Symbolism for Amino Acids and Peptides.
