What’s New

Some disorders were found in the process of sorting TPA data from EMBL-Bank.
Details are as follows:

Coverage: Subset of TPA data from EMBL-Bank, 865 entries with following accession numbers.

  HE804769-HE804772
  HG322958-HG323812
  BN001513-BN001519
  FR749997

Period: From 2013.04.24 to 2013.07.27
Services: anonymous FTP，getentry
Situation: In anonymous FTP: Intrinsically, TPA data should be separated into a directory (/ddbj_database/tpa/ddbjnew/) to distinguish from primary data. However, following TPA entries were included in the same files with primary data.

directory: ftp://ftp.ddbj.nig.ac.jp/ddbj_database/ddbjnew/
file name: DDBJNEWr93.043.dat.gz （contains HG322958-HG323812）
           DDBJNEWr93.046.dat.gz （contains HG322958-HG323812）
           DDBJNEWr93.050.dat.gz （contains BN001513-BN001519,FR749997）
           DDBJNEWr93.054.dat.gz （contains HG322958-HG323812）
           DDBJNEWr93.056.dat.gz （contains HG322958-HG323812）
           DDBJNEWr93.065.dat.gz （contains HG322958-HG323812）

In getentry: The TPA entries were not loaded into getentry.

Measure: We have fixed the relevant software tool.
For anonymous FTP: The TPA entries will be reallocated correctly after DDBJ periodical release 94.
For getentry: The TPA entries have been loaded into getentry.

We apologize for your inconvenience.

DDBJ released genome sequence data of a coral symbiont, Symbiodinium minutum, which had been submitted by Okinawa Institute of Science and Technology.

Reference; A coral symbiont genome decoded for first time
The accession numbers are as follows. They are available on getentry and DRASearch.

    scaffold CON: DF239013-DF260911 (21,899 entries)
    WGS: BASF01000001-BASF01033816 (BASF.gz) (33,816 entries)
    raw data: DRR003834-DRR003864

    GSS: GA393224-GA605429 (212,206 entries)

DDBJ released genome sequence data of Japanese quail, Coturnix japonica, which had been submitted by the Tokyo University of Agriculture.
The accession numbers are as follows. They are available on getentry and DRASearch.
    scaffold CON: DF260915-DF266788 (5,874 entries)     WGS: BASJ01000001-BASJ01528405 (BASJ.gz) (528,405 entries)     raw data: DRR002288-DRR002301

DDBJ updated TPA CON data of vase tunicate (Ciona intestinalis), which had been submitted by Kyoto University.
The accession numbers are as follows. They are available on getentry.
    TPA CON: HT000001-HT001272 (1,272 entries)

DDBJ released genome sequence data of Pacific bluefin tuna (Thunnus orientalis), which had been submitted by National Research Institute of Fisheries Science.
The accession numbers are as follows. They are available on getentry.
    WGS: BADN01000001-BADN01133062 (BADN.gz) (133,062 entries)