DDBJ Center News Archive

News from 2012

Release of GSS data of coelacanth (Latimeria chalumnae)

2012年12月27日
DDBJ newly released GSS data derived from coelacanth (Latimeria chalumnae), which had been submitted by National Institute of Genetics.

Available at getentry.
The accession numbers are as follows;

  • GSS: GA605430-GA720357 (114,928 entries)
Services: ddbj Keywords: Announcement

DDBJ Rel. 91.0, DAD (DDBJ amino acid database) Rel. 61.0 Completed

December 18,2012
DDBJ Rel. 91.0
DAD (DDBJ amino acid database) Rel. 61.0
  • Date: Dec. 18, 2012
  • 25,302,083 entries     7,351,129,523 aa (total number of residues)
  • DAD Release Note
Services: ddbj Keywords: Announcement

Business closed for the New Year holidays

December 18,2012
DDBJ will be closed from December 29 to January 3 for the New Year holidays. » Suspension of the DDBJ activity during the New Year Holidays.
Services: bioproject,biosample,gea,dra,dta Keywords: Announcement

Suspension of the DDBJ activity during the New Year Holidays

December 03,2012
We at DDBJ will temporally close our office during the New Year Holidays, in observance of the Japanese custom, New DDBJ Nucleotide Sequence Submission System and data release are also closed.
However, the computer search/analysis and FTP are available as usual.

Inquiries for data submission, data update, search/analysis, supercomputer account application, etc., web form posting and E-mail sending are available throughout the holidays. But, please note in advance that replies from DDBJ is after the reopening of the office in 2013.[generate_table class=t04]DDBJ office close:
Services: ddbj Keywords: Announcement

DDBJ/EMBL/GenBank Feature Table Definition revised

November 30,2012
Feature Table Definition is the common annotation manual among the three banks (DDBJ, EMBL-Bank, GenBank) for the construction of the DDBJ/EMBL/GenBank International Nucleotide Sequence Database. It was revised to version 10.2 in November 2012.
Services: ddbj Keywords: Announcement

Report for DDBJ activities in NAR

November 27,2012
DDBJ activities were introduced in the following papers appeared in Nucleic Acids Research.

"DDBJ new system and service refactoring"
Osamu Ogasawara, Jun Mashima, Yuichi Kodama, Eli Kaminuma, Yasukazu Nakamura, Kousaku Okubo and Toshihisa Takagi
Nucl. Acids Res. (2013) 41 (D1): D25-D29.

"The International Nucleotide Sequence Database Collaboration"
Yasukazu Nakamura, Guy Cochrane and Ilene Karsch-Mizrachi on behalf of the International Nucleotide Sequence Database Collaboration
Nucl. Acids Res. (2013) 41 (D1): D21-D24.
Services: ddbj Keywords: Announcement

Release of WGS data of diamondback moth (Plutella xylostella)

November 16,2012
DDBJ newly released WGS data derived from diamondback moth (Plutella xylostella), which had been submitted by National Institute of Agrobiological Sciences.

Available at getentry.

The accession numbers are as follows;


  • WGS: BAGR01000001-BAGR01088530 (BAHO.gz) (88,530 entries)
Services: ddbj Keywords: Announcement

(Nov. 9-14) DDBJ network services will be unavailable for power outage of the NIG

October 31,2012
DDBJ network services will be unavailable at the following schedule because of the electric power outage of the NIG(National Institute of Genetics) and maintenance of the NIG SuperComputer. Please note that the suspended period depends on the service.
ServicesScheduled (JST)
getentry, ARSA,Nov. 9 (Fri) 15:00 - Nov. 12 (Mon) 12:00
DDBJ Nucleotide Sequence Submission SystemNov. 9 (Fri) 15:00 - Nov. 13 (Tue) 24:00
D-way, DRA, DTA, BioProject,Nov. 9 (Fri) 15:00 - Nov. 14 (Wed) 12:00
Anonymous-FTP(DRA data is not included)Nov. 9 (Fri) 15:00 - Nov. 12 (Mon) 12:00
Nov. 14 (Wed) 15:00 - Nov. 14 (Wed) 17:30
Anonymous-FTP(DRA data)Nov. 9 (Fri) 15:00 - Nov. 14 (Wed) 17:30
DDBJ HPNov. 9 (Fri) 18:00 - Nov. 14 (Wed) 9:00
BLAST, ClustalW, MiGAP,
DDBJ Read Annotation Pipeline,
NIG SuperComputer
Nov. 10 (Sat) 9:00 - Nov. 13 (Tue) 24:00
Thank you for your cooperation and understanding.
All services were resumed. Thank you for your cooperation. (Nov. 14 at 17:00 JST)
Services: ddbj Keywords: Maintenance

Submission through "SAKURA" was terminated

October 31,2012
Submission through "SAKURA" was terminated on October 31, 2012 at 17:00(JST).
Thank you for having used for a long time.

From now on, please use "A new DDBJ Nucleotide Sequence Submission System".You can download HELP file of the submission system(PDF).

 Reference: New DDBJ Nucleotide Sequence Submission System will be available on Oct. 3, 2012
Services: ddbj Keywords: Announcement

DRA Submission FAQ website is available

October 25,2012
DRA Submission FAQ website is available.
Services: dra Keywords:

DDBJ Rel. 90.1,DAD Rel. 60.1 released

October 19,2012
DDBJ Rel. 90.1 and DAD Rel.60.1 were released, because some disorders were found in DDBJ Rel. 90.0,Rel.60.0 (released on Sep. 2012).

    Services: ddbj Keywords: Announcement

    Apologies for defects in DDBJ and DAD data

    October 12,2012
    A disorder was found in a software tool to load entries from EMBL-Bank to DDBJ. Details are as follows:

      Services: ddbj Keywords: Announcement

      New DDBJ Nucleotide Sequence Submission System

      October 03,2012
      A new DDBJ Nucleotide Sequence Submission System has been released today.
      http://www.ddbj.nig.ac.jp/sub/websub-e.html
      You can download HELP file of the submission system(PDF).
      Services: ddbj Keywords: Announcement

      New web site of NIG SuperComputer system is available on OCT 1, 2012

      October 01,2012
      Date: October 1, 2012
      From: NIG supercomputer administrator group

      Dear NIG supercomputer users,
      NIG supercomputer was renewed on March 1 2012. As a result of this renewal, we decided to open the new web site, http://sc.ddbj.nig.ac.jp, to improve the usability of NIG supercomputer.
      sc.ddbj.nig.ac.jp in English is still under construction, but please be patient. We are going to improve the contents of the site shortly.
      Services: ddbj Keywords: Announcement

      New DDBJ Nucleotide Sequence Submission System will be available on Oct. 3, 2012

      September 28,2012
      A new DDBJ Nucleotide Sequence Submission System will be released on October 3, 2012.
      This system has much more effective interface to input annotation than SAKURA.We also revise the error check function. The new submission system is equipped with "jParser", which is also used in Mass Submission System (MSS).


      Submission through "SAKURA" will be terminated on October 31, 2012 at 17:00(JST). Please check the following notes.
      Notes about SAKURA
      • Data of saved entries and templates, whose submission is in progress, are not transferred into the new submission system.
      • Please complete your submission prior to the termination of SAKURA.
      Services: ddbj Keywords: Announcement

      DDBJ Rel. 90.0, DAD (DDBJ amino acid database) Rel. 60.0 Completed

      September 28,2012
      DDBJ Rel. 90.0
      DAD (DDBJ amino acid database) Rel. 60.0
      • Date: Sep. 28, 2012
      • 24,480,625 entries    7,093,168,589 aa (total number of residues)
      • DAD Release Note
      Services: ddbj Keywords: Announcement

      Additional new lines on COMMENT for Japan Paten Office (JPO) data

      September 28,2012
      COMMENT part was added new lines of PA, PT and PS in all nucleotide and amino acid sequence data of Japan Paten Office (JPO).


      [Additional lines]
      PA: Applicant name
      PT: Invention title
      PS: Sequence number indicated by applicant

      DDBJ constructed FF of all JPO entries to reflect new COMMENT and released them in DDBJ release 90 and JPO cumulated amino acid data files.

      [Example]
      COMMENT    OS   human           PN   JP 2010599999-A/100           PD   29-SEP-2010           
      PF   20-NOV-2006 JP 2008583186           PR   15-MAR-2003 US 60/525115           PA   DNA Data Bank of Japan           
      PI   hanako mishima,taro iden           PT   "Genetic Markers Expressed In Tumors"           PS   N55           
      CC   genetic maker for genetic diagnosis           FH   Key Location/Qualifiers           FT   misc_feature    1..88           
      FT   /note="genetic maker"

      [DDBJ FTP site]
      Please get JPO data from following site.

      JPO Nucleotide sequence data:
      ftp://ftp.ddbj.nig.ac.jp/ddbj_database/ddbj/

      JPO Amino acid sequence data:
      ftp://ftp.ddbj.nig.ac.jp/ddbj_database/patent/
      Services: ddbj Keywords: Announcement

      The Report for the 25th International Collaborators Meeting

      September 28,2012
      International Nucleotide Sequence Database Collaboration (INSDC), consisted of DDBJ, EBI and NCBI, hold the international collaborators meeting every year.
      In 2012, the meeting was held at NCBI in USA, 11-13 June, to discuss practical matters to maintain and update nucleotide sequence data archives; DDBJ, EMBL-Bank, GenBank, Sequence Read Archive (SRA) and Trace Archive.
      The outcomes of the meeting are summarized here.
      Services: ddbj Keywords: Announcement

      DDBJ Original version was added to the ClustalW

      September 27,2012
      ClustalW is a general purpose multiple sequence alignment program for DNA or proteins.
      DDBJ added DDBJ Original version (Version 1.83, Modified by Dr. Kirill Kryukov) options of the ClustalW.

      In the "Version 1.83", you can specify the detailed option parameters for Tree calculation and Bootstrap.
      Please refer to ClustalW HELP "DDBJ Original version (Version 1.83, Modified by Dr. Kirill Kryukov) options" for details.
      Services: ddbj Keywords: Announcement

      Release of genome sequence data of coelacanth (Latimeria chalumnae)

      September 24,2012
      DDBJ released genome sequence data derived from coelacanth (Latimeria chalumnae), which had been submitted by Tokyo Institute of Technology.

      Available by getentry and DRASearch

      The accession numbers are as follows;


      • scaffold CON: DF158906-DF196766 (37,861 entries)
      • WGS: BAHO01000001-BAHO01475424 (BAHO.gz) (475,424 entries)
      • raw data: DRA000580 (DRR002180-DRR002183), DRA000594 (DRR002285-DRR002287)
      Services: ddbj Keywords: Announcement

      Public key can be registered on the account web.

      September 18,2012
      Public key can be registered on the account web.
      Services: dra Keywords:

      (Oct. 3) NIG and DDBJ network temporary down

      September 11,2012
      NIG (National Institute of Genetics) and DDBJ network will be unavailable at the following schedule because of the network maintenance.

      • Date: Oct. 3(Wed), 2012 at AM 2:00 - 4:00 (JST)
                (60 minutes interception during this time)
      Thank you for your cooperation.
      Services: ddbj Keywords: Maintenance

      DDBJ services temporary down due to lightning of Sep. 6

      September 07,2012
      Because of power outage caused by lightning on Septermber 6(Thu) at 18:30 - 19:00 (JST), DDBJ services was temporally halted.

      As of September 7(Fri) at 9:00 (JST), many services works normally. But some services are still unavailable and recovery works continues.

      Thank you for your understanding and cooperation.
      (Note: 9/7 12:00 ) Resuming time of suspended services are as follows:・ARSA; 9/6 20:00
      ・getentr; 9/6 20:00
      ・DDBJ anonymous FTP server; 9/7 10:00
      ・D-way; 9/7 11:00
      ・DRA Search; 9/7 11:00
      ・BioProject Search; 9/7 11:00
      ・Trace Archeive Search; 9/7 11:00
      ・Supercomputer System; 9/7 07:50
      Currently, all services are normally available. DDBJ apologizes for your long-time inconvenences.
      Services: ddbj Keywords: Maintenance

      Release of genome sequence data of Theileria orientalis strain Shintoku

      September 06,2012
      DDBJ newly released genome sequence data derived from Theileria orientalis strain Shintoku, which had been submitted by Hokkaido University.(Available by getentry )

      The accession numbers are as follows;

      • chromosomes : AP011946-AP011949 (4 entries)
      • apicoplast : AP011950
      • mitochondrion : AP011951
      Services: ddbj Keywords: Announcement

      (Change) DDBJ will change 'SAKURA' into a new submission system

      August 28,2012
      (Change) The termination of SAKURA has been changed on October 31, 2012 at 17:00(JST).

      DDBJ will change 'SAKURA' into a new submission system 'DDBJ Nucleotide Sequence Submission System' at the end of September, 2012.
      After changing a system, you cannot use SAKURA. Please check the following notes.
      Notes about 'SAKURA'
      • Data of saved entries and templates in progress are not carried on into the new submission system.
        So please complete your registration prior to the termination of SAKURA.

      DDBJ has accepted nucleotide sequence data submissions by 'SAKURA' from 1995. Thank you for using SAKURA for a long time.
      If you have any question on SAKURA, please send your message from Contact us (SAKURA Support).
      Thank you for your understanding and cooperation.
      Services: ddbj Keywords: Announcement

      Release of TSA data of great pond snail (Lymnaea stagnalis)

      August 08,2012

      DDBJ released TSA data derived from great pond snail (Lymnaea stagnalis), which had been submitted by Tokushima Bunri University.

      The accession numbers are as follows. (Available by getentry and DRASearch)

          TSA: FX180119 - FX296473 (116,355 entries)
          raw data: DRR002012

      Services: ddbj Keywords: Announcement

      Personal whole genome sequencing data of Prof. Masaru Tomita is released.

      July 31,2012
      Personal whole genome sequencing data of Prof. Masaru Tomita (Institute for Advanced Biosciences, Keio University) was released as DRA000583.
      Services: dra Keywords:

      Personal whole genome sequencing data of Prof.Masaru Tomita was released

      July 31,2012
      Personal whole genome sequencing data of Prof.Masaru Tomita (Institute for Advanced Biosciences, Keio University) was released as DRA000583.
      Services: ddbj Keywords: Announcement

      (Aug.13-14)Suspension of some parts of DDBJ activities during summer holidays

      July 31,2012
      We at DDBJ will suspend our business on releasing data and answering inquiries from August 13 and 14, 2012. All WWW services are available. But, our replies to your inquiries are after August 15.

      Thank you for your understanding and cooperation.
      Services: ddbj Keywords: Announcement

      SRA XML schema was updated to 1.4

      July 19,2012
      SRA XML schema was updated to 1.4
      Services: dra Keywords:

      Release of EST data of a species of planarians (Dugesia japonica)

      July 06,2012
      DDBJ released EST data derived from a species of planarians (Dugesia japonica), which had been submitted by RIKEN. (Available by getentry )


      The accession numbers are as follows;
        Services: ddbj Keywords: Announcement

        Release of GSS data of African clawed frog (Xenopus laevis)

        July 04,2012
        DDBJ newly released GSS data derived from African clawed frog (Xenopus laevis), which had been submitted by National Institute of Genetics. (Available by getentry )


        The accession numbers are as follows;
          Services: ddbj Keywords: Announcement

          DAD Rel. 59.1 released

          July 03,2012
          DAD released Rel.59.1, because a part of trouble had been found in Rel.59.0 (released on June 2012).


            Services: ddbj Keywords: Announcement

            Apologies for the trouble of in DAD release 59.0

            July 02,2012
            In DAD release 59.0 (released on June 2012), trouble was found in a part. Details are as follows:
            • Situation: 42,563 entries were incorrectly duplicated.
            • Services: Anonymous FTP
            • Measure: DDBJ revised DAD release 59.0 as 59.1 on July 2, 2012.
            • Corresponding File: ddbjtpa1.DAD.gz

            We apologize for your inconvenience.
            Services: ddbj Keywords: Announcement

            DDBJ/EMBL/GenBank Feature Table Definition revised

            June 29,2012
            Feature Table Definition (FT-Doc) is the common annotation manual among the three banks (DDBJ, EMBL-Bank, GenBank) for the construction of the DDBJ/EMBL/GenBank International Nucleotide Sequence Database. Feature Table Definition was revised in May 2012. Version is 10.1.
            Services: ddbj Keywords: Announcement

            DDBJ Rel. 89.0, DAD (DDBJ amino acid database) Rel. 59.0 Completed

            June 27,2012
            DDBJ Rel. 89.0

            DAD (DDBJ amino acid database) Rel. 59.0
            Services: ddbj Keywords: Announcement

            Release of EST data of Asian Swallowtail (Papilio xuthus) and Common Mormon (Papilio polytes)

            June 04,2012
            DDBJ released EST data derived from Asian Swallowtail (Papilio xuthus) and Common Mormon (Papilio polytes), which had been submitted by National Institute of Advanced Industrial Science and Technology.  (Available by getentry )
            The accession numbers are as follows ;


            Papilio xuthus
            ・FY174038-FY192407 ( 18,370 entries) 5'-EST
            ・FY192408-FY210626 ( 18,219 entries) 3'-EST

                           total: 36,589 entries

            Papilio polytes
            ・FY302525-FY312114 (  9,590 entries) 5'-EST
            ・FY312115-FY319715 (  7,601 entries) 3'-EST
            ・FY319716-FY339489 ( 19,774 entries) 5'-EST
            ・FY339490-FY358875 ( 19,386 entries) 3'-EST

                           total: 56,351 entries
            Services: ddbj Keywords: Announcement

            Release of whole genome sequence data of Solanum lycopersicum

            June 04,2012
            INSDC newly released whole genome sequence data of Solanum lycopersicum, which had been submitted by the Boyce Thompson Institute for Plant Research.
            Kazusa DNA Research Institute plays a major role in the International Tomato Genome Sequencing Project.
            Reference URL:  Boyce Thompson Institute for Plant Research (News)
                Tomato genome becomes fully sequenced paving the way for healthier fruits and vegetables
            The accession numbers are as follows; (Available by getentry and DRASearch )

            genome

            • WGS:      AEKE02000001 - AEKE02026877 (AEKE.gz) ( 26,877 entries)
            • Chr CON: CM001064 - CM001075 ( 12 entries)
            • CON:       GL758110 - GL761332 ( 3,223 entries)

            RNA-Seq data

            Services: ddbj Keywords: Announcement

            DRA and BioProject video tutorials are available

            May 31,2012
            DDBJ Sequence Read Archive and BioProject video tutorials are available.

            DDBJ Sequence Read Archive Video TutorialBioProjectYoutube
            Services: ddbj Keywords: Announcement

            DRA and BioProject video tutorials are available

            May 25,2012
            DRA and BioProject video tutorials are available.
            Services: dra Keywords:

            Release of EST data of human (Homo sapiens)

            May 21,2012
            DDBJ newly released EST data derived from human (Homo sapiens), which had been submitted by RIKEN.  (Available by getentry )

            The accession numbers are as follows ;


            ・HY000001 - HY183282 ( 183,282 entries) 5'-EST
            ・HY183283 - HY377477 ( 194,195 entries) 3'-EST

                            total: 377,477 entries
            Services: ddbj Keywords: Announcement

            Suspension of some parts of DDBJ activities during Japanese holidays

            April 19,2012
            We at DDBJ will suspend our business on releasing data and answering inquiries from April 28 to 30 and from May 3 to 6, 2012. Search, analysis and other WWW services are available. We will resume the normal business from May 7.
            Thank you for your understanding and cooperation.
            Services: ddbj Keywords: Maintenance

            (4/23-26) DRA and BioProject systems will be unavailable partly

            April 18,2012
            D-way system, DRA file server and the dra directory (except the fastq directory) of DDBJ anonymous FTP site will be unavailable from Apr. 23 at 17:30 to Apr. 26 at 13:00 (JST) due to the relocation of disk storage.During this time, DRA and BioProject data submission systems and the SRA Lite download service will be unavailable.The fastq download service, DRASearch and BPSearch will be available.Thank you for your understanding and cooperation.
            Maintenance works finished. Thank you for your cooperation. (Apr. 26, 2012 (Thu) at 12:10 (JST))
            Services: ddbj Keywords: Maintenance

            Release of EST data of honeybee (Apis mellifera carnica)

            April 11,2012
            DDBJ released EST data derived from honeybee (Apis mellifera carnica), which had been submitted by RIKEN.  (Available by getentry )
            The accession numbers are as follows ;
            ・HX282115-HX327225 ( 45,111 entries) 5'-EST
            ・HX327226-HX373155 ( 45,930 entries) 3'-EST

                          total: 91,041 entries
            Services: ddbj Keywords: Announcement

            Release of EST data of bread wheat (Triticum aestivum)

            April 09,2012
            DDBJ released EST data derived from bread wheat (Triticum aestivum), which had been submitted by Yokohama City University.  (Available by getentry )
            The accession numbers are as follows ;
            ・HX000001 - HX201765 ( 201,765 entries)
            ・HX247045 - HX257200 (  10,156 entries)

                            total: 211,921 entries
            Services: ddbj Keywords: Announcement

            Submitters can set the hold date for a maximum of 2 years

            March 29,2012
            Submitters can set the hold date for a maximum of 2 years.
            Services: dra Keywords:

            NIG starts the application for new supercomputer system

            March 23,2012
            National Institute of Genetics new supercomputer system are updated in March, we start the operation this system from March 21, 2012.

            The new supercomputer system have more than 350 high‐throughput cluster machines with the latest CPU , a server with 10TB memory, large capacity storage total of 5PB.Their connected with high-speed transfer network.

            For using, you need to apply for a supercomputer account from "Apply the use of super computer system (in Japanese)".
            For more information, please refer to the "New supercomputer introduction (in Japanese)" and "How to use the super computer system (in Japanese)".
            Services: ddbj Keywords: Announcement

            Now submitters can update D-way account.

            March 01,2012
            Now submitters can update D-way account. Please login D-way and update account information when necessary.
            Services: dra Keywords:

            (Feb. 25) NIG and DDBJ network temporary down

            February 14,2012
            NIG (National Institute of Genetics) and DDBJ network will be unavailable at the following schedule, due to the preliminary works for the computer system replacement in NIG scheduled in March, 2012.

            • Date: Feb. 25 (Sat), 2012 at AM 9:00 - AM 11:00 (JST)
            Thank you for your cooperation and understanding.
            Services: ddbj Keywords: Maintenance

            Release of EST data of eucaly (Eucalyptus camaldulensis)

            February 02,2012
            DDBJ released EST data derived from eucaly (Eucalyptus camaldulensis), which had been submitted by Kazusa DNA Research Institute .  (Available by getentry )
            The accession numbers are as follows ;
            • FY782538-FY841121 ( 58,584 entries )
            Services: ddbj Keywords: Announcement

            Release of genome sequence data of eucaly (Eucalyptus camaldulensis)

            January 25,2012
            DDBJ released genome sequence data derived from eucaly (Eucalyptus camaldulensis), which had been submitted by Kazusa DNA Research Institute.
            Reference : Eucalyptus camaldulensis Genome Database
            The accession numbers are as follows ;
            • CON          DF097775 - DF126446 ( 28,672 entries)  (Available by getentry)
            • WGS         BADO01000001 - BADO01274001 (BADO.gz) ( 274,001 entries)
            • raw data     DRA000466, DRA000467
            Services: ddbj Keywords: Announcement

            (Feb. 3) ARSA database search temporary unavailable

            January 20,2012
            ARSA is a high-speed data retrieval system provided by DDBJ via WWW and Web API. DDBJ and DAD database search in ARSA is unavailable in the following schedule to update each of released data (DDBJ Release 88.0 and DAD Release 58.0).

            Details are as follows:
            • Date & Time: Feb. 3, 2012 (Fri) 9:00 - Feb. 6, 2012 (Mon) 9:00 JST
                 (We will announce on this page when the service resumes)
            • Unavailable related services: ARSA reference function in TX Search
            Thank you for your understanding and cooperation.
            Maintenance works finished. Thank you for your cooperation. (Feb. 5, 2012 (Sun) at 11:10)
            Services: ddbj Keywords: Maintenance

            DDBJ Rel. 88.0, DAD (DDBJ amino acid database) Rel. 58.0 Completed

            January 12,2012
            DDBJ Rel. 88.0- Since DDBJ is planning to improve its systems substantially, during the first quarter in 2012, DDBJ will skip to make up its next periodical release in March 2012.
            So, DDBJ periodical release 89 will be prepared in June 2012.

            DAD (DDBJ amino acid database) Rel. 58.0- Since DDBJ is planning to improve its systems substantially, during the first quarter in 2012, DDBJ will skip to make up the next periodical release of DAD in March 2012.
            So, DAD periodical release 59 will be prepared in June 2012.
            Services: ddbj Keywords: Announcement

            Release of full length enriched cDNA sequence data of pig (Sus scrofa)

            January 11,2012
            DDBJ newly released full length enriched cDNA sequence (HTC) data derived from pig (Sus scrofa), which had been submitted by National Institute of Agrobiological Sciences.   (Available by getentry )
            The accession numbers are as follows ;
            • AK389169 - AK401026 ( 11,858 entries)
            Services: ddbj Keywords: Announcement

            (Jan. 17) NIG and DDBJ network temporary down

            January 10,2012
            NIG (National Institute of Genetics) and DDBJ network will be unavailable at the following schedule because of the network maintenance.

            • Date: Jan. 17 (Tue), 2012 at AM 3:45 - AM 5:00 (JST) (30 minutes interception during this time)
            Thank you for your cooperation.
            Services: ddbj Keywords: Maintenance

            Report for DDBJ activities in NAR

            January 05,2012
            DDBJ activities were introduced in the following papers appeared in Nucleic Acids Research Vol.40 Database Issue.

            "The International Nucleotide Sequence Database Collaboration"
            Ilene Karsch-Mizrachi, Yasukazu Nakamura, and Guy Cochrane on behalf of the International Nucleotide Sequence Database Collaboration
            Nucl. Acids Res. 2012 40: D33-D37; doi:10.1093/nar/gkr1006.

            "The DNA Data Bank of Japan launches a new resource, the DDBJ Omics Archive of functional genomics experiments"
            Yuichi Kodama, Jun Mashima, Eli Kaminuma, Takashi Gojobori, Osamu Ogasawara, Toshihisa Takagi, Kousaku Okubo, and Yasukazu Nakamura
            Nucl. Acids Res. 2012 40: D38-D42; doi:10.1093/nar/gkr994.

            "The sequence read archive: explosive growth of sequencing data"
            Yuichi Kodama, Martin Shumway, and Rasko Leinonen on behalf of the International Nucleotide Sequence Database Collaboration
            Nucl. Acids Res. 2012 40: D54-D56; doi:10.1093/nar/gkr854.
            Services: ddbj Keywords: Announcement
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