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INSDC specifications に関する論文が公開されました
BioSample
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biosample
サンプル属性
サンプル属性
List all sample attributes
Core package (
Packages
,
Genome assembly sample
)
Standard
SARS-CoV-2: clinical or host-associated
SARS-CoV-2: wastewater surveillance
Microbe
Model organism or animal
Metagenome or environmental
Invertebrate
Human
Plant
Virus
Beta-lactamase
Omics
Pathogen
Pathogen: clinical or host-associated
Pathogen: environmental/food/other
Genome, metagenome or marker sequences (MIxS compliant)
MIGS Cultured Bacterial/Archaeal Genomic Sequences (MIGS.ba)
Eukaryotic Genomic Sequences (MIGS.eu)
Viral Genomic Sequences (MIGS.vi)
Environmental/Metagenome Genomic Sequences (MIMS.me)
Metagenome-assembled Genome Sequences (MIMAG)
Single Amplified Genome Sequences (MISAG)
Specimen Marker Sequences (MIMARKS.specimen)
Survey related Marker Sequences (MIMARKS.survey)
Uncultivated Viral Genome Sequences (MIUVIG)
Environmental package (MIxS Sample)
No package
agriculture
air
built
food-animal and animal feed
food-farm environment
food-food production facility
food-human foods
host-associated
human-associated
human-gut
human-oral
human-skin
human-vaginal
hydrocarbon resources-cores
hydrocarbon resources-fluids/swabs
microbial mat/biofilm
miscellaneous or artificial
plant-associated
sediment
soil
symbiont-associated/sludge
wastewater/sludge
water
DEFINITION
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定義表
*: 必須
**数字: 同一数字グループの中で少なくとも一つ必須（選択必須）