HOME > Search and Analysis
Notice
Termination of a part of DDBJ services (February 3, 2010)

Database Search

getentry
Data retrieval by accession numbers, etc.
ARSA
All-round Retrieval of Sequence and Annotation
TXSearch
Retrieval of unified taxonomy database
Homology Search
FASTA | BLAST | PSI-BLAST | SSEARCH
HMMPFAM
A motif search program against Pfam on the basis of Hidden Markov Model (HMM)
DDBJ Vector Screening System

Phylogenetics

ClustalW
Multiple alignment and Tree-making

Submission of Gene Expression Data

CIBEX
Gene expression DB, data submission and search by MIAME as intenational guide line

Genome Analyses

GIB
Genome information broker
GIB-V
GIB for Viruses
GTPS
Reannotation of bacterial genomes using a new common protocol
GTOP
Genome to protein structure and function
H-Invitational Database CIB-DDBJ Flat File Server
  Closing H-Inv DB mirror site
Mirroring H-InvDB
Database of full-length cDNAs assigned functional annotation as a result of H-Invitational
  Closing H-Inv DB mirror site

Protein Database and Structure

PMD
Protein mutant database

Software developed at CIB-DDBJ

WINA
A Window Analysis Program for the Number of Synonymous and Nonsynonymous Nucleotide
DendroMaker for Macintosh
Software package for drawing dedrograms