7th D-STEP with Japan-Vietnam Workshop

7th with Japan-Vietnam Workshop

This workshop was held as a data scientist training session in the Vietnam-Japan Bilateral Workshop on Bioinformatics and Bioresources.

Program： Introduction of DDBJ (DNA Data Bank of Japan)

Title	Instructor	Reference material
Data repository and DDBJ	Tomoyo Iizuka（DDBJ Center）
UNIX commands and programming environment	Yoshihiro Okuda（DDBJ Center）
What you can do with the super-computer in DDBJ	Yoshihiro Okuda（DDBJ Center）

New Generation Sequencing analysis

Title	Instructor	Reference material
Introduction to Microbial Genome Analysis	Yasuhiro Tanizawa（DDBJ Center）
Genome Analysis of Eukaryotes ~ Gene structural annotation and functional annotation~	Mika Sakamoto（NIG）
Comparative genomics -1	Takeshi Kawashima（DDBJ Center）
Comparative genomics -2	Takeshi Kawashima（DDBJ Center）
Comparative genomics -3	Takeshi Kawashima（DDBJ Center）

OMICS analysis

Title	Instructor	Reference material
Metabolomic data minig using searchable repositories	Nozomu Sakurai（DDBJ Center）
Metagenomics of gut microbiome	Hiroshi Mori（NIG）
Genomics for human hereditary disease	Chihiro Hata（DDBJ Center）

International collaborations and intellectual property

Title	Instructor	Reference material
Review on Three Decades Collaboration between Vietnam and University of Tsukuba with International Collaboration and Enforcement of Partnerships towards Life Science Industry	Kazuo Watanabe（Tsukuba univ.）
Integrative species delimitation of Vietnamese jumping spiders (Araneae: Salticidae)	Phung Thi Hong Luong（IEBR/VAST)
Case study for utilization of intellectual property	Mutsuaki Suzuki（NIG）
Basic knowledge for Patent and introduction of patent office data in DDBJ	Hideo Aono（DDBJ Center）

International collaborations and intellectual property

Title	Instructor	Reference material
Implementation of the access and benefit sharing of biological resources (ABS) in Vietnam: A case of international collaboration between Vietnam-Japan in the Institute of Ecology and Biological Resources	Nguyen Truong Son Nguyen Duc Anh(IEBR/VAST)
Vietnam ABS regulatory framework: From policies to practices	Ta Thi Kieu Anh（BCA/VEA）