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7th D-STEP with Japan-Vietnam Workshop

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  • 7th D-STEP with Japan-Vietnam Workshop

7th with Japan-Vietnam Workshop

This workshop was held as a data scientist training session in the Vietnam-Japan Bilateral Workshop on Bioinformatics and Bioresources.

  • Date:August 24-31 2021
  • Date:January 19-24 2023
  • Venue:Online
  • Capacity: 128
  • English:English
  • Program: Introduction of DDBJ (DNA Data Bank of Japan)

    Title Instructor Reference material
    Data repository and DDBJ Tomoyo Iizuka(DDBJ Center)
    UNIX commands and programming environment Yoshihiro Okuda(DDBJ Center)
    What you can do with the super-computer in DDBJ Yoshihiro Okuda(DDBJ Center)


    New Generation Sequencing analysis

    Title Instructor Reference material
    Introduction to Microbial Genome Analysis Yasuhiro Tanizawa(DDBJ Center)
    Genome Analysis of Eukaryotes
    ~ Gene structural annotation and functional annotation~
    Mika Sakamoto(NIG)
    Comparative genomics -1 Takeshi Kawashima(DDBJ Center)
    Comparative genomics -2 Takeshi Kawashima(DDBJ Center)
    Comparative genomics -3 Takeshi Kawashima(DDBJ Center)


    OMICS analysis

    Title Instructor Reference material
    Metabolomic data minig using searchable repositories Nozomu Sakurai(DDBJ Center)
    Metagenomics of gut microbiome Hiroshi Mori(NIG)
    Genomics for human hereditary disease Chihiro Hata(DDBJ Center)


    International collaborations and intellectual property

    Title Instructor Reference material
    Review on Three Decades Collaboration between Vietnam and University of Tsukuba
    with International Collaboration and Enforcement of Partnerships towards Life Science Industry
    Kazuo Watanabe(Tsukuba univ.)
    Integrative species delimitation of Vietnamese jumping spiders (Araneae: Salticidae) Phung Thi Hong Luong(IEBR/VAST)
    Case study for utilization of intellectual property Mutsuaki Suzuki(NIG)
    Basic knowledge for Patent and introduction of patent office data in DDBJ Hideo Aono(DDBJ Center)


    International collaborations and intellectual property

    Title Instructor Reference material
    Implementation of the access and benefit sharing of biological resources (ABS) in Vietnam:
    A case of international collaboration between Vietnam-Japan in the Institute of
    Ecology and Biological Resources
    Nguyen Truong Son
    Nguyen Duc Anh(IEBR/VAST)
    Vietnam ABS regulatory framework: From policies to practices Ta Thi Kieu Anh(BCA/VEA)

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