Metadata

Data model

TogoVar-repository uses a data model common to SNP and SV.

• BioProject and BioSample are required.
• Variants are linked to Study/SampleSet through Dataset.
• SampleSet, Experiment and Dataset are internally referenced by serial numbers.

Accession numbers

• SNP: study (dstd), variant (dss). Public dss variants are merged to rs in the next dbSNP build.
• SV: study (dstd), variant call (dssv), variant region (dsv)

Submission excel

Download a submission excel file and fill in the file. Submit variants of different types as separate studies.

TogoVar-repository submission excel