• Apologies for not being able to search newly published data of JGA with DDBJ search
  • [Resumed] Disabilities in the DDBJ Search keyword search
  • The requirement to state the location and date of sample collection

TogoVar-repository

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Metadata

Data model

TogoVar-repository uses a data model common to SNP and SV.

TogoVar-repository data model
TogoVar-repository data model
  • BioProject and BioSample are required.
  • Variants are linked to Study/SampleSet through Dataset.
  • SampleSet, Experiment and Dataset are internally referenced by serial numbers.

Accession numbers

  • SNP: study (dstd), variant (dss). Public dss variants are merged to rs in the next dbSNP build.
  • SV: study (dstd), variant call (dssv), variant region (dsv)

Submission excel

Download a submission excel file and fill in the file. Submit variants of different types as separate studies.

TogoVar-repository submission excel