2025-6-26 Status update

All entries described below have been released. Getentry now supports searching all flatfiles that have been publicly released from INSD.

Releasing status of the entries from ENA and GenBank that were previously unavailable through getentry.

  • Conventional (non-bulk) entries:
    • ENA … Completed
    • GenBank … Completed
  • Bulk entries:
    • TSA … Completed
    • TLS … Completed
    • WGS of 4-letter prefix … Completed
    • WGS of 6-letter prefix
      • ENA … Completed
      • GenBank … Completed
    • WGS of TPA … Completed

We have identified an issue where entries published during a following period from ENA and GenBank have not been incorporated into getentry.

The affected entries are as follows:

  • Conventional (non-bulk) entries:
    • ENA: October 1st, 2024 - April 8th, 2025
    • GenBank: February 19th, 2025 - April 8th, 2025
  • Bulk entries (WGS, TSA, and TLS):
    • ENA and GenBank: February 19th, 2025 - Now

We have included the missing entries in our daily publication processing. However, due to the large number of affected entries, it will take approximately 2 months for these entries to become visible in getentry. During this time, the DDBJNEW*.gz file size at https://ddbj.nig.ac.jp/public/ddbj_database/ddbjnew/ will be larger than usual.

We sincerely apologize for any inconvenience this may cause.