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BioSample

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biosample
Sample attributes

Sample attributes

Core package (Packages, Genome assembly sample)

Standard
- SARS-CoV-2: clinical or host-associated
- SARS-CoV-2: wastewater surveillance
- Microbe
- Model organism or animal
- Metagenome or environmental
- Invertebrate
- Human
- Plant
- Virus
- Beta-lactamase
- Omics
Pathogen
- Pathogen: clinical or host-associated
- Pathogen: environmental/food/other
Genome, metagenome or marker sequences (MIxS compliant)
- MIGS Cultured Bacterial/Archaeal Genomic Sequences (MIGS.ba)
- Eukaryotic Genomic Sequences (MIGS.eu)
- Viral Genomic Sequences (MIGS.vi)
- Environmental/Metagenome Genomic Sequences (MIMS.me)
- Metagenome-assembled Genome Sequences (MIMAG)
- Single Amplified Genome Sequences (MISAG)
- Specimen Marker Sequences (MIMARKS.specimen)
- Survey related Marker Sequences (MIMARKS.survey)
- Uncultivated Viral Genome Sequences (MIUVIG)

Environmental package (MIxS Sample)

No package
agriculture
air
built
food-animal and animal feed
food-farm environment
food-food production facility
food-human foods
host-associated
human-associated
human-gut
human-oral
human-skin
human-vaginal
hydrocarbon resources-cores
hydrocarbon resources-fluids/swabs
microbial mat/biofilm
miscellaneous or artificial
plant-associated
sediment
soil
symbiont-associated/sludge
wastewater/sludge
water

After selecting a sample package, click DEFINITION to review definitions of attributes. See definition in the table

*: Required
**number: At least one attribute is required in attributes